Software¶
The code behind the studies, importers and tools. Code paths in studies link into these repositories.
| Analysis workspace | One-off scripts kept on the analysis machine beside their per-case output. Not published; the useful ones move into vitaldb-bench. |
| TimeNet VitalDB reader | The reader that loads VitalDB's .vital files with this atlas's corrections applied: records after each reset put back in order, every sample placed by its count, the corrected scale factors and the whole-file time zero. |
| lineaccess | Finds accesses to invasive pressure lines (flushes, blood draws, zeroing) in the pressure waveform itself. |
| metrology-atlas | The engine that turns this dataset's YAML files into the atlas JSON and this site. |
| physiosync | Timing corrections for multi-signal physiological recordings: the stamp sawtooth, hidden frame clocks, the ECG-to-PPG delay and its sawtooth, and the resolution of fiducial points. Dataset-neutral. |
| vitaldb (Python package) | The VitalDB project's own Python reader for .vital files, as published on PyPI. |
| vitaldb-bench | The timing and data-quality audit of VitalDB: the scripts behind most studies in this atlas, the clock model and corrected-time reader, the per-case labels, and resumable TimeNet builds with their fidelity checks. |
| vitaldb-resolution | Every recorded VitalDB time and value as a probability distribution of the true value: native resolution, or a mixture of resolutions recovered from heaped data. |